Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | AB669_11505 | O31859 | Positive | 2764658 - 2765536 | 33214.9 |
| 3-beta hydroxysteroid dehydrogenase | AB669_11510 | Q9Y7K4 | Positive | 2765690 - 2766583 | 31315.2 |
| arac family transcriptional regulator | AB669_11515 | Not Available | Positive | 2766596 - 2767513 | 34961.9 |
| nudix hydrolase | AB669_11520 | Not Available | Negative | 2767560 - 2768306 | 29149.0 |
| hypothetical protein | AB669_11525 | Not Available | Negative | 2768324 - 2770402 | 77406.5 |
| sigma factor sigb regulation protein rsbq | AB669_11530 | Not Available | Positive | 2770562 - 2771392 | 30712.8 |
| hypothetical protein | AB669_11535 | Not Available | Positive | 2771798 - 2772421 | 22346.4 |
| peptidase m28 | AB669_11540 | E5A6Z0 | Positive | 2772550 - 2773902 | 49887.1 |
| tspo and mbr | AB669_11545 | Q8KBX2 | Positive | 2773944 - 2774417 | 18035.7 |
| patatin | AB669_11550 | O34731 | Positive | 2774453 - 2776765 | 87676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

