Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | AB669_11095 | Not Available | Positive | 2667327 - 2668205 | 32766.1 |
| hypothetical protein | AB669_11100 | Not Available | Positive | 2669487 - 2672291 | 107552.0 |
| hypothetical protein | AB669_11105 | Not Available | Positive | 2672296 - 2672577 | 10366.8 |
| hypothetical protein | AB669_11110 | Not Available | Negative | 2672592 - 2672894 | 11036.7 |
| pirin | AB669_11115 | P46852 | Negative | 2672960 - 2673682 | 26654.2 |
| dna alkylation repair protein | AB669_11120 | Not Available | Negative | 2673762 - 2674442 | 26088.5 |
| methyltransferase | AB669_11125 | P54458 | Positive | 2674604 - 2675335 | 28739.5 |
| phospholipid phosphatase | AB669_11130 | Q57819 | Positive | 2675332 - 2675895 | 21368.6 |
| zinc/iron permease | AB669_11135 | Not Available | Positive | 2675895 - 2676611 | 26163.6 |
| exonuclease | AB669_11140 | Not Available | Negative | 2676844 - 2677791 | 35843.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

