Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase dimerization domain protein | AB669_11045 | Q3ZC84 | Negative | 2653026 - 2654396 | 50578.1 |
| hypothetical protein | AB669_11050 | Not Available | Positive | 2654694 - 2655638 | 34970.0 |
| hypothetical protein | AB669_11055 | Not Available | Negative | 2655663 - 2655944 | 10517.8 |
| atp-dependent dna helicase | AB669_11060 | Q6GFF2 | Positive | 2656126 - 2658423 | 87251.0 |
| chromosome segregation protein smc | AB669_11065 | Q8KBS6 | Positive | 2658468 - 2662007 | 135591.0 |
| peptidase m20 | AB669_11070 | Not Available | Positive | 2662037 - 2663023 | 36389.4 |
| 16s rrna methyltransferase | AB669_11075 | Q11VU7 | Negative | 2663072 - 2663707 | 24069.1 |
| transmembrane glycosyltransferase | AB669_11080 | Not Available | Negative | 2663731 - 2664831 | 42121.9 |
| queuine trna-ribosyltransferase | AB669_11085 | Q8RAM9 | Positive | 2665087 - 2666217 | 42520.2 |
| permease | AB669_11090 | Not Available | Positive | 2666241 - 2667323 | 41122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

