Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | AB669_10945 | P48791 | Negative | 2631025 - 2632005 | 37070.8 |
| o-succinylhomoserine sulfhydrylase | AB669_10950 | P55218 | Negative | 2632138 - 2633304 | 42741.1 |
| osmotically inducible protein osmc | AB669_10955 | Not Available | Negative | 2633398 - 2633820 | 15418.7 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | AB669_10960 | A6L5X6 | Negative | 2633893 - 2634696 | 29721.7 |
| thymidylate synthase | AB669_10965 | Q11VK5 | Positive | 2634890 - 2635684 | 30127.1 |
| dihydrofolate reductase | AB669_10970 | P11045 | Positive | 2635714 - 2636229 | 19624.3 |
| preprotein translocase subunit secd | AB669_10975 | D0MIN4 | Positive | 2636411 - 2639392 | 107375.0 |
| nadh dehydrogenase | AB669_10980 | P95200 | Positive | 2639586 - 2640890 | 48393.9 |
| hydroxymethylglutaryl-coa lyase | AB669_10985 | Not Available | Positive | 2640961 - 2641821 | 31185.5 |
| gnat family acetyltransferase | AB669_10990 | Q6GI30 | Negative | 2641843 - 2642265 | 16006.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

