Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | AB669_10840 | O31834 | Negative | 2610039 - 2610251 | 7922.01 |
| hypothetical protein | AB669_10845 | Not Available | Negative | 2610266 - 2611099 | 32209.3 |
| hypothetical protein | AB669_10850 | Not Available | Negative | 2611266 - 2611859 | 22459.1 |
| rna polymerase sigma factor rpod | AB669_10855 | P33656 | Positive | 2612230 - 2613090 | 32664.0 |
| amp nucleosidase | AB669_10860 | P0AE13 | Negative | 2613505 - 2614365 | 31717.6 |
| atpase aaa | AB669_10865 | Q8A128 | Negative | 2614459 - 2615697 | 46046.0 |
| clp protease | AB669_10870 | Q64NW2 | Negative | 2615681 - 2616388 | 26159.4 |
| peptidylprolyl isomerase | AB669_10875 | B3QXY8 | Negative | 2616607 - 2617953 | 51066.5 |
| Trna-leu | Not Available | Not Available | Positive | 2618022 - 2618106 | Not Available |
| 3-oxoacyl-acp synthase | AB669_10885 | Not Available | Negative | 2618253 - 2618705 | 16824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

