Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB669_09100 | Not Available | Negative | 2206600 - 2206860 | 9440.74 |
| hypothetical protein | AB669_09105 | Not Available | Positive | 2206970 - 2207281 | 12154.6 |
| pyrophosphatase | AB669_09110 | P42979 | Negative | 2207288 - 2207617 | 12435.9 |
| d-tyrosyl-trna(tyr) deacylase | AB669_09115 | A5FMN0 | Negative | 2207633 - 2208085 | 16268.9 |
| 3-oxoacyl-acp synthase | AB669_09120 | A6QBY0 | Negative | 2208151 - 2209197 | 38306.9 |
| clp protease clps | AB669_09125 | Not Available | Positive | 2209325 - 2209606 | 10868.9 |
| thioredoxin | AB669_09130 | Not Available | Negative | 2209641 - 2210240 | 22630.5 |
| 16s rrna methyltransferase | AB669_09135 | Q11UL8 | Negative | 2210324 - 2211109 | 29892.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | AB669_09140 | Q89ZK3 | Positive | 2211281 - 2212360 | 39319.0 |
| mfs transporter | AB669_09145 | Not Available | Positive | 2212735 - 2213910 | 42858.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

