Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | AB669_08790 | Not Available | Negative | 2123667 - 2124653 | 35551.9 |
| exopolyphosphatase | AB669_08795 | Q5SM25 | Negative | 2124693 - 2125703 | 37602.6 |
| nucleoside diphosphate kinase | AB669_08800 | A5F9Z6 | Positive | 2125817 - 2126236 | 15169.8 |
| peptidylprolyl isomerase | AB669_08805 | P0A9L3 | Positive | 2126494 - 2127129 | 22921.2 |
| hypothetical protein | AB669_08810 | Not Available | Positive | 2127160 - 2127366 | 7233.58 |
| rna-binding protein | AB669_08815 | Not Available | Negative | 2127453 - 2127743 | 11212.0 |
| dna recombination protein recf | AB669_08820 | A6H141 | Negative | 2127736 - 2128839 | 42730.2 |
| hypothetical protein | AB669_08825 | Not Available | Positive | 2128883 - 2129356 | 18143.0 |
| hypothetical protein | AB669_08830 | Not Available | Positive | 2129477 - 2130142 | 24250.9 |
| peptidyl-trna hydrolase | AB669_08835 | Q11RT7 | Negative | 2130257 - 2130817 | 20560.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

