Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | AB669_08375 | Q5LIK3 | Negative | 1999821 - 2000546 | 27970.1 |
| fis family transcriptional regulator | AB669_08380 | Not Available | Positive | 2000664 - 2003015 | 87449.7 |
| hypothetical protein | AB669_08385 | Not Available | Negative | 2003100 - 2003366 | 9738.28 |
| isoleucyl-trna synthase | AB669_08390 | Q5LCU8 | Positive | 2003633 - 2007034 | 129339.0 |
| molecular chaperone dnak | AB669_08395 | Not Available | Positive | 2007065 - 2007448 | 14352.0 |
| peptidase a8 | AB669_08400 | B2RI39 | Positive | 2007448 - 2008050 | 22812.1 |
| 2-oxoglutarate dehydrogenase | AB669_08405 | P0AFG7 | Negative | 2008214 - 2009437 | 43032.0 |
| 2-oxoglutarate dehydrogenase | AB669_08410 | Q59106 | Negative | 2009488 - 2012286 | 104878.0 |
| deoxyribodipyrimidine photolyase | AB669_08415 | Q7NMD1 | Negative | 2012553 - 2013827 | 48163.9 |
| hypothetical protein | AB669_08420 | Not Available | Positive | 2014009 - 2015643 | 60292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

