Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AB669_07405 | Q1RGU3 | Positive | 1768819 - 1769553 | 26164.8 |
| phosphonate abc transporter atp-binding protein | AB669_07410 | P30769 | Positive | 1769553 - 1770305 | 28143.0 |
| oxidoreductase | AB669_07415 | Q07ZR3 | Positive | 1770342 - 1771223 | 33287.9 |
| lipoprotein | AB669_07420 | Not Available | Positive | 1771322 - 1772371 | 39001.6 |
| methionine sulfoxide reductase a | AB669_07425 | B0VL72 | Positive | 1772936 - 1773478 | 20618.6 |
| acyl-coa dehydrogenase | AB669_07430 | Not Available | Negative | 1773505 - 1774590 | 40404.6 |
| membrane protein | AB669_07435 | Not Available | Negative | 1774639 - 1775262 | 24024.1 |
| dna topoisomerase iv subunit a | AB669_07440 | O51066 | Negative | 1775646 - 1778519 | 107269.0 |
| cytidine deaminase | AB669_07445 | Not Available | Negative | 1778612 - 1779100 | 18010.6 |
| hypothetical protein | AB669_07450 | Not Available | Positive | 1779246 - 1784243 | 183333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

