Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | AB669_00675 | A6L2N4 | Negative | 176803 - 177651 | 32030.5 |
| triosephosphate isomerase | AB669_00680 | Q11PZ7 | Negative | 177652 - 178413 | 27695.9 |
| glucose-1-phosphate thymidylyltransferase | AB669_00685 | Not Available | Negative | 178454 - 179620 | 42967.6 |
| 50s ribosomal protein l31 type b | AB669_00690 | A5EVX0 | Negative | 179693 - 179941 | 9697.61 |
| hypothetical protein | AB669_00695 | O58010 | Negative | 180151 - 180558 | 15018.2 |
| cysteine desulfurase | AB669_00700 | Q2INI7 | Positive | 180679 - 181890 | 44184.0 |
| scaffolding protein | AB669_00705 | O31270 | Positive | 181991 - 182404 | 14890.7 |
| heme biosynthesis protein hemy | AB669_00710 | Q9XIK3 | Positive | 182481 - 182807 | 11865.9 |
| amp-binding protein | AB669_00715 | P44446 | Positive | 182916 - 184832 | 71806.9 |
| lysyl-trna synthetase | AB669_00720 | A0M5H8 | Positive | 184954 - 186663 | 64745.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

