Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AB669_07040 | Q73EU1 | Positive | 1692356 - 1694260 | 70148.2 |
| hypothetical protein | AB669_07045 | A6GZG1 | Positive | 1694584 - 1696170 | 60593.6 |
| malate dehydrogenase | AB669_07050 | Q9V0D5 | Positive | 1696191 - 1697285 | 39156.4 |
| alpha-l-fucosidase | AB669_07055 | Q99KR8 | Negative | 1697350 - 1698774 | 54621.9 |
| hypothetical protein | AB669_07060 | Not Available | Negative | 1698830 - 1700425 | 58619.2 |
| membrane protein | AB669_07065 | Not Available | Negative | 1700445 - 1703711 | 119498.0 |
| rok family transcriptional regulator | AB669_07070 | D2PPN2 | Negative | 1703823 - 1705013 | 42815.5 |
| signal peptidase | AB669_07075 | P0A1W3 | Negative | 1705168 - 1706364 | 45598.7 |
| dihydrodipicolinate reductase | AB669_07080 | A0LZI4 | Negative | 1706466 - 1707200 | 27204.3 |
| hypothetical protein | AB669_07085 | Not Available | Negative | 1707205 - 1707849 | 23541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

