Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate:protein symporter | AB669_06990 | P96603 | Negative | 1678501 - 1679736 | 44025.5 |
| rna polymerase sigma-70 factor | AB669_06995 | Not Available | Positive | 1679923 - 1680519 | 23132.1 |
| hypothetical protein | AB669_07000 | Not Available | Negative | 1680522 - 1681523 | 37060.4 |
| hypothetical protein | AB669_07005 | Not Available | Positive | 1681682 - 1682851 | 44001.2 |
| hypothetical protein | AB669_07010 | Not Available | Positive | 1683349 - 1686423 | 113218.0 |
| hypothetical protein | AB669_07015 | Not Available | Positive | 1686434 - 1687978 | 57336.2 |
| isoaspartyl peptidase | AB669_07020 | Q54WW4 | Negative | 1688026 - 1689057 | 36692.4 |
| antibiotic abc transporter atp-binding protein | AB669_07025 | O31708 | Negative | 1689102 - 1690865 | 66388.9 |
| pseudouridine synthase | AB669_07030 | Q5LGZ6 | Negative | 1690910 - 1691662 | 28525.2 |
| hypothetical protein | AB669_07035 | Not Available | Positive | 1691748 - 1692215 | 17301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

