Pseudonocardia sp. SCN 73-27

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. SCN 73-27 is a rod-shaped bacterium characterized by its single replicon. This organism is part of the genus Pseudonocardia, which is known for its role in various ecological niches, particularly in soil and association with plant roots. The accession number for this strain is MEGH00000000.1, providing a reference for genomic information and further studies related to its biology. The rod shape of Pseudonocardia sp. SCN 73-27 is indicative of its cellular structure and potential physiological capabilities. Rod-shaped bacteria often exhibit a range of metabolic activities, which can influence their interactions within their environment. The presence of a single replicon suggests a streamlined genomic organization, which may be advantageous for efficient replication and adaptation to environmental changes. Ecologically, Pseudonocardia species are known to engage in symbiotic relationships, particularly with insects, and may contribute to soil health through their metabolic processes. The specific traits of Pseudonocardia sp. SCN 73-27 highlight its potential role in nutrient cycling and its interactions with other microorganisms within its habitat. Understanding the characteristics of this strain can provide insights into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. SCN 73-27
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardia sp. SCN 73-27 ABT15_C0099, whole genome

Gene Summary

Adenine Count

952600 bp

Thymine Count

950235 bp

Guanine Count

2527451 bp

Cytosine Count

2520747 bp

Genome Length

6952598 bp

Protein-coding Genes

6431 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetamidaseABT15_19690Not AvailableNegative4033764 - 403476536180.9
sam-dependent methyltransferaseABT15_19695Not AvailableNegative4034844 - 403544021492.2
cystathionine beta-synthaseABT15_19700Not AvailablePositive4035475 - 403685147179.8
hypothetical proteinABT15_19705Not AvailablePositive4037129 - 403940280867.0
deoxyribodipyrimidine photolyaseABT15_19715Not AvailablePositive4040502 - 404183349903.6
hypothetical proteinABT15_19720Not AvailablePositive4041889 - 404260524306.2
sodium abc transporter permeaseABT15_19725Not AvailableNegative4042684 - 404387141141.7
abc transporter atp-binding proteinABT15_19730Not AvailableNegative4043868 - 404476732331.6
fis family transcriptional regulatorABT15_19735Not AvailableNegative4044825 - 404663365747.5
methane monooxygenaseABT15_19740Not AvailablePositive4047098 - 404873563882.3

Displaying genes 3821 – 3830 of 6517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.