Citrobacter portucalensis

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter portucalensis is a Gram-negative, rod-shaped bacterium that possesses flagella, enabling motility. This species is characterized by having a single replicon, which is noteworthy for its genomic structure. The sequence data for Citrobacter portucalensis can be accessed via accession number NZ_CP039328.1. As a member of the Citrobacter genus, which is often found in various environmental and clinical settings, C. portucalensis may be involved in a range of biological processes. Its Gram-negative nature suggests a complex cell wall structure, which typically includes an outer membrane that can provide an advantage in resisting certain antibiotics and environmental stresses. The motility conferred by its flagella may play a significant role in its ecological interactions, potentially aiding in colonization of diverse habitats, including soil, water, and the gastrointestinal tracts of animals. Understanding the traits of Citrobacter portucalensis can provide insights into its ecological roles and its potential impact in various environments, including its interactions with other microorganisms and its role in nutrient cycling. Overall, the characteristics of C. portucalensis highlight its adaptability and suggest that it may have significant implications in both natural ecosystems and clinical microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter portucalensis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiome
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter portucalensis


Gene Summary

Adenine Count

30562 bp

Thymine Count

29607 bp

Guanine Count

32211 bp

Cytosine Count

32757 bp

Genome Length

125137 bp

Protein-coding Genes

136 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid stabilization protein stbaE7703_RS24645Not AvailableNegative11601 - 1198714666.4
is5-like element is903b family transposaseE7703_RS24650Not AvailablePositive12568 - 1353636614.0
alkene reductaseE7703_RS24655Not AvailableNegative13594 - 136773251.81
is5 family transposaseE7703_RS24670Not AvailableNegative14404 - 1537236656.9
is6-like element is26 family transposaseE7703_RS24675Not AvailablePositive15504 - 1620827896.9
alkene reductaseE7703_RS24680Not AvailablePositive16260 - 1677219521.3
is5-like element iskpn26 family transposaseE7703_RS24685Not AvailablePositive17087 - 1806737800.5
hypothetical proteinE7703_RS26215Not AvailablePositive18049 - 182678124.93
iron-containing alcohol dehydrogenaseE7703_RS24690Not AvailableNegative18555 - 1972141676.3
threonine/serine dehydrataseE7703_RS24695Not AvailableNegative20144 - 2108533619.5

Displaying genes 11 – 20 of 136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

435 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 435 metabolites

Health Effects

No health effects information available for this bacterium.