Tenacibaculum holothuriorum str. S2-2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum holothuriorum str. S2-2 is a rod-shaped bacterium characterized by having a single replicon. This species falls under the genus Tenacibaculum, which is known for its association with marine environments. The genome of Tenacibaculum holothuriorum str. S2-2 has been sequenced, with the corresponding data available under the accession number LAPZ00000000.1. The rod shape of Tenacibaculum holothuriorum str. S2-2 is indicative of its morphology, which is typical for many bacteria within the Tenacibaculum genus. This shape may facilitate its motility and nutrient absorption in aquatic environments, although specific motility mechanisms or ecological roles have not been delineated in the available data. Understanding the characteristics of Tenacibaculum holothuriorum str. S2-2 contributes to the broader knowledge of the Tenacibaculum genus, which includes species known for their ecological roles in marine ecosystems. This bacterium's adaptation to its marine habitat suggests potential interactions with marine invertebrates, such as holothurians (sea cucumbers), which it may influence or depend upon. The study of this species could provide insights into microbial dynamics in marine ecosystems and the roles of specific bacterial taxa in the health and functioning of marine life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum holothuriorum
StrainS2-2

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum holothuriorum strain S2-2 contig31, whole genome

Gene Summary

Adenine Count

1082086 bp

Thymine Count

1089863 bp

Guanine Count

482534 bp

Cytosine Count

493171 bp

Genome Length

3147654 bp

Protein-coding Genes

2802 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxinWH52_03345Not AvailablePositive716208 - 71669318860.1
tonb-dependent receptorWH52_03350Not AvailablePositive716991 - 719771103394.0
multidrug transporterWH52_03355Not AvailablePositive719799 - 72097140895.0
hypothetical proteinWH52_03360Not AvailablePositive721164 - 72146610533.2
nifr3 family tim-barrel proteinWH52_03365Not AvailablePositive721561 - 72256237582.6
abc transporter permeaseWH52_03370Not AvailableNegative722567 - 72376644536.0
ribosome-binding factor aWH52_03375Not AvailableNegative723795 - 72419014871.0
ligand-binding protein sh3WH52_03380Not AvailableNegative724218 - 72487424670.1
histidine kinaseWH52_03385Not AvailableNegative724935 - 72568429016.7
hypothetical proteinWH52_03390Not AvailableNegative725657 - 72627424314.7

Displaying genes 651 – 660 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.