Tenacibaculum holothuriorum str. S2-2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum holothuriorum str. S2-2 is a rod-shaped bacterium characterized by having a single replicon. This species falls under the genus Tenacibaculum, which is known for its association with marine environments. The genome of Tenacibaculum holothuriorum str. S2-2 has been sequenced, with the corresponding data available under the accession number LAPZ00000000.1. The rod shape of Tenacibaculum holothuriorum str. S2-2 is indicative of its morphology, which is typical for many bacteria within the Tenacibaculum genus. This shape may facilitate its motility and nutrient absorption in aquatic environments, although specific motility mechanisms or ecological roles have not been delineated in the available data. Understanding the characteristics of Tenacibaculum holothuriorum str. S2-2 contributes to the broader knowledge of the Tenacibaculum genus, which includes species known for their ecological roles in marine ecosystems. This bacterium's adaptation to its marine habitat suggests potential interactions with marine invertebrates, such as holothurians (sea cucumbers), which it may influence or depend upon. The study of this species could provide insights into microbial dynamics in marine ecosystems and the roles of specific bacterial taxa in the health and functioning of marine life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum holothuriorum
StrainS2-2

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum holothuriorum strain S2-2 contig31, whole genome

Gene Summary

Adenine Count

1082086 bp

Thymine Count

1089863 bp

Guanine Count

482534 bp

Cytosine Count

493171 bp

Genome Length

3147654 bp

Protein-coding Genes

2802 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ion transporterWH52_11725Not AvailablePositive2491095 - 249201835446.6
membrane proteinWH52_11730Not AvailableNegative2492015 - 24922067148.12
oxidoreductaseWH52_11735Not AvailablePositive2492270 - 249300127423.9
hypothetical proteinWH52_11740Not AvailablePositive2493003 - 249368326423.3
hypothetical proteinWH52_11745Not AvailablePositive2493686 - 249407214707.5
hypothetical proteinWH52_11750Not AvailableNegative2494113 - 249485628446.3
branched-chain amino acid aminotransferaseWH52_11755Not AvailableNegative2495092 - 249614139684.0
branched-chain amino acid aminotransferaseWH52_11760Not AvailablePositive2496264 - 249678219286.4
sam-dependent methyltransferaseWH52_11770Not AvailablePositive2497229 - 249790025744.6
hypothetical proteinWH52_11775Not AvailableNegative2497926 - 249866327993.4

Displaying genes 2271 – 2280 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.