Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Duffyella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Duffyella |
| Species | Duffyella gerundensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Duffyella gerundensis isolate E_g_EM595 chromosome 1, complete
Gene Summary
Adenine Count
843143 bp
Thymine Count
839675 bp
Guanine Count
1046560 bp
Cytosine Count
1045635 bp
Genome Length
3775020 bp
Protein-coding Genes
3338 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | EM595_RS16905 | Not Available | Positive | 3704764 - 3705759 | 37380.8 |
| glxa family transcriptional regulator | EM595_RS16910 | Not Available | Negative | 3705744 - 3706679 | 34629.7 |
| isochorismatase family protein | EM595_RS16915 | Not Available | Negative | 3706676 - 3707224 | 20197.1 |
| xylulokinase | EM595_RS16920 | Not Available | Negative | 3707368 - 3708834 | 52586.3 |
| xylose isomerase | EM595_RS16925 | Not Available | Negative | 3708849 - 3710171 | 49837.6 |
| d-xylose abc transporter substrate-binding protein | EM595_RS16930 | Not Available | Positive | 3710541 - 3711533 | 35555.9 |
| xylose abc transporter atp-binding protein | EM595_RS16935 | Not Available | Positive | 3711591 - 3713117 | 55939.4 |
| xylose abc transporter permease xylh | EM595_RS16940 | Not Available | Positive | 3713110 - 3714285 | 40695.3 |
| d-xylose utilization transcriptional activator xylr | EM595_RS16945 | Not Available | Positive | 3714369 - 3715547 | 45096.0 |
| cytochrome b561 | EM595_RS16950 | Not Available | Positive | 3715689 - 3716228 | 20899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
