Duffyella gerundensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Duffyella

Description

Duffyella gerundensis is characterized by its possession of three replicons. This trait is significant as it may influence its genetic stability and adaptability in various environments. The organism is represented by three accessions in the sequence database: NZ_LN907828.1, NZ_LN907827.1, and NZ_LN907829.1. These accessions provide genomic information that can be utilized for further research into the species' phylogenetic relationships and functional capabilities. The multi-replicon structure could suggest a complex genomic architecture that might facilitate metabolic versatility or resilience under different environmental stresses. Understanding the genetic framework of Duffyella gerundensis can also contribute to ecological insights. The presence of multiple replicons may allow for a rapid response to environmental changes, which is crucial for survival and competition among microbial communities. This adaptability could play a role in its ecological niche, influencing its interactions with other microorganisms and its overall contribution to the ecosystem in which it resides.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusDuffyella
SpeciesDuffyella gerundensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duffyella gerundensis isolate E_g_EM595 plasmid pEM02, complete

Gene Summary

Adenine Count

31742 bp

Thymine Count

32659 bp

Guanine Count

35399 bp

Cytosine Count

35143 bp

Genome Length

134943 bp

Protein-coding Genes

136 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phage protein phosphataseEM595_RS10190Not AvailableNegative2197490 - 219813724044.9
hypothetical proteinEM595_RS21465Not AvailablePositive2198159 - 21982904578.52
AttlNot AvailableNot AvailablePositive2198539 - 2198555Not Available
IntegraseEM595_RS10195Not AvailableNegative2198625 - 219968940108.6
hypothetical proteinEM595_RS10200Not AvailablePositive2200048 - 220075527545.7
Transcriptional regulatorEM595_RS10205Not AvailableNegative2200923 - 22011418156.88
Tail proteinEM595_RS10210Not AvailableNegative2201213 - 220240343078.2
Tail proteinEM595_RS10215Not AvailableNegative2202397 - 220292418765.6
Phage tail tape measure proteinEM595_RS10220Not AvailableNegative2202927 - 220536586091.9
Tail proteinEM595_RS10225Not AvailableNegative2205355 - 22054804713.62

Displaying genes 1 – 10 of 4135 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.