Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Duffyella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Duffyella |
| Species | Duffyella gerundensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Duffyella gerundensis isolate E_g_EM595 chromosome 1, complete
Gene Summary
Adenine Count
843143 bp
Thymine Count
839675 bp
Guanine Count
1046560 bp
Cytosine Count
1045635 bp
Genome Length
3775020 bp
Protein-coding Genes
3338 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | EM595_RS13990 | Not Available | Negative | 3027897 - 3028676 | 29517.8 |
| yqcc family protein | EM595_RS13995 | Not Available | Negative | 3028676 - 3029011 | 12581.3 |
| secy-interacting protein | EM595_RS14000 | Not Available | Negative | 3029599 - 3030150 | 20666.7 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EM595_RS14005 | Not Available | Positive | 3030216 - 3031058 | 32100.9 |
| nucleotide 5'-monophosphate nucleosidase ppnn | EM595_RS14010 | Not Available | Positive | 3031227 - 3032591 | 50868.5 |
| flap endonuclease xni | EM595_RS14015 | Not Available | Positive | 3032629 - 3033384 | 27925.8 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EM595_RS14020 | Not Available | Negative | 3033416 - 3034516 | 41998.8 |
| duf423 domain-containing protein | EM595_RS14025 | Not Available | Negative | 3034509 - 3034904 | 14373.0 |
| transcriptional regulator gcva | EM595_RS14030 | Not Available | Negative | 3034952 - 3035869 | 34293.3 |
| ygdi/ygdr family lipoprotein | EM595_RS14035 | Not Available | Negative | 3036206 - 3036430 | 7947.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
