Geminocystis sp. NIES-3708

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Geminocystis

Description

Geminocystis sp. NIES-3708 is characterized by having three replicons in its genomic structure. This trait is significant as it suggests a complex genetic organization that can influence its adaptability and metabolic capabilities. The strain has been cataloged with three specific accessions: NZ_AP014820.1, NZ_AP014818.1, and NZ_AP014819.1. The presence of multiple replicons may allow Geminocystis sp. NIES-3708 to possess distinct genetic regions that can be dedicated to different functional roles, potentially enhancing its survival in various environmental conditions. This genetic arrangement might facilitate efficient regulation of gene expression and enable the organism to respond dynamically to changes in its surroundings. Biologically, Geminocystis sp. NIES-3708 could play a role in its ecosystem by contributing to nutrient cycling or interacting with other microbial communities. The complexity of its genomic structure may also indicate a capacity for horizontal gene transfer, which could enhance its adaptability and resilience. As such, Geminocystis sp. NIES-3708 exemplifies how genetic traits can inform our understanding of microbial ecology and the potential functions of microorganisms in their environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusGeminocystis
SpeciesGeminocystis sp. NIES-3708
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geminocystis sp. NIES-3708


Gene Summary

Adenine Count

6102 bp

Thymine Count

6248 bp

Guanine Count

2616 bp

Cytosine Count

2939 bp

Genome Length

17905 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseGM3708_RS17535Not AvailablePositive864 - 170931903.7
hypothetical proteinGM3708_RS17540Not AvailablePositive1718 - 197210189.6
duf2283 domain-containing proteinGM3708_RS17545Not AvailablePositive1969 - 22179467.09
plasmid replication protein, cyrepa1 familyGM3708_RS17550Not AvailablePositive2943 - 6677142427.0
hypothetical proteinGM3708_RS17555Not AvailableNegative7010 - 781930040.1
tyrosine-type recombinase/integraseGM3708_RS17560Not AvailablePositive8015 - 886031910.8
s1 family peptidaseGM3708_RS17565Not AvailablePositive8982 - 980330660.8
duf5615 family pin-like proteinGM3708_RS17570Not AvailableNegative9828 - 1023815526.8
duf433 domain-containing proteinGM3708_RS17575Not AvailableNegative10340 - 1105627497.1
hypothetical proteinGM3708_RS17580Not AvailableNegative11144 - 1181825998.2

Displaying genes 1 – 10 of 26 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.