Geminocystis sp. NIES-3708

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Geminocystis

Description

Geminocystis sp. NIES-3708 is characterized by having three replicons in its genomic structure. This trait is significant as it suggests a complex genetic organization that can influence its adaptability and metabolic capabilities. The strain has been cataloged with three specific accessions: NZ_AP014820.1, NZ_AP014818.1, and NZ_AP014819.1. The presence of multiple replicons may allow Geminocystis sp. NIES-3708 to possess distinct genetic regions that can be dedicated to different functional roles, potentially enhancing its survival in various environmental conditions. This genetic arrangement might facilitate efficient regulation of gene expression and enable the organism to respond dynamically to changes in its surroundings. Biologically, Geminocystis sp. NIES-3708 could play a role in its ecosystem by contributing to nutrient cycling or interacting with other microbial communities. The complexity of its genomic structure may also indicate a capacity for horizontal gene transfer, which could enhance its adaptability and resilience. As such, Geminocystis sp. NIES-3708 exemplifies how genetic traits can inform our understanding of microbial ecology and the potential functions of microorganisms in their environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusGeminocystis
SpeciesGeminocystis sp. NIES-3708
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geminocystis sp. NIES-3708


Gene Summary

Adenine Count

6102 bp

Thymine Count

6248 bp

Guanine Count

2616 bp

Cytosine Count

2939 bp

Genome Length

17905 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imma/irre family metallo-endopeptidaseGM3708_RS17585Not AvailableNegative11822 - 1281137933.8
duf3987 domain-containing proteinGM3708_RS17590Not AvailableNegative13682 - 1609092391.4
hypothetical proteinGM3708_RS17595Not AvailableNegative16310 - 1701427632.7
helix-turn-helix domain-containing proteinGM3708_RS17600Not AvailableNegative17110 - 1743912513.3
hypothetical proteinGM3708_RS17605Not AvailableNegative17436 - 176217284.7
type isp restriction/modification enzymeGM3708_RS17615Not AvailablePositive947 - 4315132490.0
fic family proteinGM3708_RS17620Not AvailablePositive4425 - 551041977.8
helix-turn-helix domain-containing proteinGM3708_RS17625Not AvailableNegative5691 - 623621633.7
helix-turn-helix domain-containing proteinGM3708_RS17630Not AvailablePositive6790 - 832259503.2
dnab-like helicase c-terminal domain-containing proteinGM3708_RS17635Not AvailablePositive9107 - 12112113051.0

Displaying genes 11 – 20 of 26 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.