Lampropedia cohaerens str. CT6

sphereaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia cohaerens strain CT6 is a Gram-negative, spherical bacterium that exhibits aerobic respiration. As a Gram-negative organism, it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and susceptibility to certain antibiotics. The spherical morphology of L. cohaerens CT6 suggests that it may have adaptations for specific ecological niches where such shape could confer advantages in nutrient uptake or environmental resilience. The aerobic nature of this strain indicates that it requires oxygen for growth and metabolism, positioning it within environments rich in oxygen, such as surface waters or soils that are well-aerated. This trait may also suggest potential roles in biogeochemical cycles, particularly in the oxidation of organic compounds. The combination of its Gram-negative status and aerobic lifestyle may facilitate its participation in microbial communities, where it could interact with other microorganisms in complex ways, potentially influencing nutrient cycling and organic matter decomposition. Understanding the specific ecological roles of L. cohaerens CT6 could provide insights into its contributions to environmental processes, particularly in aerobic habitats where microbial metabolism is crucial for sustaining ecosystem health. Further research into the metabolic pathways and interactions of this strain may reveal its significance in microbial ecology and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia cohaerens
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lampropedia cohaerens str. CT6

Accession NumberLBNQ00000000.1

Gene Summary

Adenine Count

573561 bp

Thymine Count

580622 bp

Guanine Count

1013239 bp

Cytosine Count

991500 bp

Genome Length

3158922 bp

Protein-coding Genes

2618 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
TransposaseAAV94_12660Not Available-2793075 - 279342112966.7
Head-tail adaptor proteinAAV94_12665Not Available-2793735 - 279405811972.4
hypothetical proteinAAV94_12670Not Available-2794051 - 27943179780.53
Portal proteinAAV94_12675Not Available-2794453 - 279595554245.8
Terminase small subunitAAV94_12680Not Available-2795962 - 279636314402.0
Putative endonucleaseAAV94_12685Not Available-2796426 - 279671910424.1
Portal-like proteinAAV94_12690P49859-2796788 - 279796643297.6
Putative prohead proteaseAAV94_12695Not Available-2797963 - 279849018809.3
Major capsid proteinAAV94_12700B0ZSF3-2798506 - 279973543291.6
hypothetical proteinAAV94_12705Not Available-2800602 - 280152834299.8

Displaying genes 1 – 10 of 2699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

224 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 224 metabolites