Lampropedia cohaerens str. CT6

sphereaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia cohaerens strain CT6 is a Gram-negative, aerobic bacterium characterized by its spherical shape. This organism possesses true flagella, which enables motility in its environment. It is notable for having a single replicon, suggesting a streamlined genomic structure. The classification of Lampropedia cohaerens str. CT6 as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, characteristic of this group. This structural feature often contributes to its resilience and adaptability in various environments, particularly in nutrient-rich settings where aerobic conditions prevail. The presence of flagella in Lampropedia cohaerens str. CT6 facilitates movement towards favorable conditions, such as areas with higher oxygen levels or nutrient availability, which is crucial for its survival and growth. The aerobic requirement of this strain implies that it relies on oxygen for its metabolic processes, influencing its ecological niche. Given these traits, Lampropedia cohaerens str. CT6 may play a role in the decomposition of organic materials in oxygen-rich environments, potentially contributing to nutrient cycling. Its motility could enhance its ability to colonize various ecological niches, reflecting an adaptive strategy to thrive in diverse habitats. This strain's unique characteristics highlight the intricate relationships between microbial life and their environments, underscoring the ecological significance of such bacteria in maintaining ecosystem balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia cohaerens
StrainCT6

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lampropedia cohaerens str. CT6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lampropedia cohaerens strain CT6 492, whole genome shotgun

Gene Summary

Adenine Count

573561 bp

Thymine Count

580622 bp

Guanine Count

1013239 bp

Cytosine Count

991500 bp

Genome Length

3158922 bp

Protein-coding Genes

2618 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive41923 - 42035Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive42162 - 45052Not Available
metal-dependent hydrolaseAAV94_00165Not AvailablePositive42416 - 4321028658.0
hypothetical proteinAAV94_00170Q987N5Positive43207 - 4428338289.5
ribulose-phosphate 3-epimeraseAAV94_00175Q9HYH5Positive44267 - 4505529154.7
hypothetical proteinAAV94_00180Q122C7Positive45110 - 4608136152.4
16s ribosomal rnaNot AvailableNot AvailablePositive45701 - 47248Not Available
hypothetical proteinAAV94_00185Not AvailablePositive46121 - 4661517981.4
c4-dicarboxylate abc transporter permeaseAAV94_00190Not AvailablePositive46615 - 4794347414.5
hypothetical proteinAAV94_00195Not AvailablePositive47989 - 4849218825.6

Displaying genes 51 – 60 of 2699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

224 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 224 metabolites

Health Effects

No health effects information available for this bacterium.