Novosphingobium sp. P6W

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. P6W is characterized by the presence of flagella, which indicates its motility and ability to navigate through various environments. This trait is essential for its survival and potential ecological interactions, as motility can influence nutrient acquisition and colonization of niches. The genomic structure of Novosphingobium sp. P6W includes four replicons, suggesting a complex genomic architecture that may confer advantages in terms of genetic diversity and adaptability. The multiple replicons may facilitate the organism's response to environmental stresses or changes, enhancing its survival in various habitats. The organism is represented in public databases with several accessions: NZ_CP030355.1, NZ_CP030352.1, NZ_CP030353.1, and NZ_CP030354.1. These accessions provide insights into its genetic makeup and allow for further study of its biochemical pathways and ecological roles. In summary, Novosphingobium sp. P6W's motility, indicated by flagella presence, along with its four replicons, points to a potentially versatile and adaptive organism. This adaptability may play a significant role in its ecological interactions, possibly influencing nutrient cycling and microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. P6W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. P6W plasmid pP6W2, complete sequence.

Gene Summary

Adenine Count

39657 bp

Thymine Count

39104 bp

Guanine Count

54268 bp

Cytosine Count

55643 bp

Genome Length

188672 bp

Protein-coding Genes

185 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c-type cytochromeTQ38_RS31485Not AvailablePositive720457 - 72111623312.8
tonb-dependent receptorTQ38_RS19625Not AvailablePositive721220 - 72335276804.6
rieske 2fe-2s domain-containing proteinTQ38_RS19630Not AvailablePositive723533 - 72486149508.1
non-heme iron oxygenase ferredoxin subunitTQ38_RS19635Not AvailablePositive724858 - 72519912319.7
marr family winged helix-turn-helix transcriptional regulatorTQ38_RS19640Not AvailablePositive725315 - 72582418541.6
class ii aldolase/adducin family proteinTQ38_RS19645Not AvailableNegative725833 - 72655826701.2
glutathione s-transferase family proteinTQ38_RS19650Not AvailableNegative726610 - 72722122336.0
amidohydrolase family proteinTQ38_RS19655Not AvailableNegative727259 - 72824837641.1
dienelactone hydrolase family proteinTQ38_RS19660Not AvailableNegative728275 - 72897325062.6
lysr family transcriptional regulatorTQ38_RS19665Not AvailablePositive729321 - 73026233887.2

Displaying genes 821 – 830 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.