Novosphingobium sp. P6W

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. P6W is characterized by the presence of flagella, which indicates its motility and ability to navigate through various environments. This trait is essential for its survival and potential ecological interactions, as motility can influence nutrient acquisition and colonization of niches. The genomic structure of Novosphingobium sp. P6W includes four replicons, suggesting a complex genomic architecture that may confer advantages in terms of genetic diversity and adaptability. The multiple replicons may facilitate the organism's response to environmental stresses or changes, enhancing its survival in various habitats. The organism is represented in public databases with several accessions: NZ_CP030355.1, NZ_CP030352.1, NZ_CP030353.1, and NZ_CP030354.1. These accessions provide insights into its genetic makeup and allow for further study of its biochemical pathways and ecological roles. In summary, Novosphingobium sp. P6W's motility, indicated by flagella presence, along with its four replicons, points to a potentially versatile and adaptive organism. This adaptability may play a significant role in its ecological interactions, possibly influencing nutrient cycling and microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. P6W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. P6W


Gene Summary

Adenine Count

609552 bp

Thymine Count

608512 bp

Guanine Count

1117362 bp

Cytosine Count

1115889 bp

Genome Length

3451315 bp

Protein-coding Genes

3240 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6771 family proteinTQ38_RS28905Not AvailableNegative797 - 9646103.19
hypothetical proteinTQ38_RS30365Not AvailablePositive1357 - 15276139.3
type ii toxin-antitoxin system vapc family toxinTQ38_RS28910Not AvailableNegative1579 - 197414297.0
type ii toxin-antitoxin system vapb family antitoxinTQ38_RS28915Not AvailableNegative1974 - 22198922.84
duf6771 family proteinTQ38_RS28920Not AvailableNegative2386 - 25776915.38
hypothetical proteinTQ38_RS30370Not AvailableNegative2652 - 27954978.1
pilz domain-containing proteinTQ38_RS30375Not AvailablePositive3253 - 380720413.9
diguanylate cyclase domain-containing proteinTQ38_RS28925Not AvailableNegative4329 - 549543314.9
eal domain-containing proteinTQ38_RS28930Not AvailableNegative6279 - 785957703.4
transposaseTQ38_RS28935Not AvailablePositive8728 - 88414452.49

Displaying genes 1 – 10 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.