Novosphingobium sp. P6W

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. P6W is characterized by the presence of flagella, which indicates its motility and ability to navigate through various environments. This trait is essential for its survival and potential ecological interactions, as motility can influence nutrient acquisition and colonization of niches. The genomic structure of Novosphingobium sp. P6W includes four replicons, suggesting a complex genomic architecture that may confer advantages in terms of genetic diversity and adaptability. The multiple replicons may facilitate the organism's response to environmental stresses or changes, enhancing its survival in various habitats. The organism is represented in public databases with several accessions: NZ_CP030355.1, NZ_CP030352.1, NZ_CP030353.1, and NZ_CP030354.1. These accessions provide insights into its genetic makeup and allow for further study of its biochemical pathways and ecological roles. In summary, Novosphingobium sp. P6W's motility, indicated by flagella presence, along with its four replicons, points to a potentially versatile and adaptive organism. This adaptability may play a significant role in its ecological interactions, possibly influencing nutrient cycling and microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. P6W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. P6W plasmid pP6W2, complete sequence.

Gene Summary

Adenine Count

39657 bp

Thymine Count

39104 bp

Guanine Count

54268 bp

Cytosine Count

55643 bp

Genome Length

188672 bp

Protein-coding Genes

185 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate synthaseTQ38_RS02810Not AvailableNegative572609 - 57369138139.0
antibiotic biosynthesis monooxygenase family proteinTQ38_RS02815Not AvailablePositive573978 - 57430412562.9
arsenate reductaseTQ38_RS02820Not AvailablePositive574433 - 57478012490.0
nicotinamide riboside transporter pnucTQ38_RS02825Not AvailablePositive574790 - 57535320818.6
aaa family atpaseTQ38_RS02830Not AvailablePositive575350 - 57588319719.6
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigTQ38_RS02835Not AvailableNegative575880 - 57662926295.7
aspartate kinaseTQ38_RS02840Not AvailablePositive576739 - 57798343925.5
catalaseTQ38_RS02845Not AvailableNegative578351 - 57988657217.0
hypothetical proteinTQ38_RS02850Not AvailableNegative580209 - 58059513376.9
nad(p)h-dependent flavin oxidoreductaseTQ38_RS02855Not AvailablePositive580741 - 58177535236.9

Displaying genes 3281 – 3290 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.