Sphingomonas sp. WG

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. WG is characterized as a rod-shaped bacterium that possesses flagella, which likely contributes to its motility. This genus is part of the broader Sphingomonadaceae family known for its diverse metabolic capabilities and ecological versatility. The presence of a single replicon indicates a streamlined genomic structure, which can be advantageous for adaptation in various environmental niches. The accession number for Sphingomonas sp. WG is LNOS00000000.1, which provides a reference for genetic and genomic studies pertaining to this specific strain. This can facilitate further research into its unique characteristics and potential applications in biotechnology or environmental microbiology. In terms of ecological insight, the genus Sphingomonas is often associated with the degradation of complex organic compounds, including pollutants. Given that Sphingomonas sp. WG has been observed in diverse environments, its flagellated rod shape may enhance its ability to navigate through various substrates, contributing to its role in bioremediation processes. Understanding the capabilities of this bacterium is crucial, as it could play a significant role in the microbial communities involved in the breakdown of environmental pollutants, thereby supporting ecosystem health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. WG
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. WG
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. WG


Gene Summary

Adenine Count

689423 bp

Thymine Count

688152 bp

Guanine Count

1327903 bp

Cytosine Count

1333521 bp

Genome Length

4038999 bp

Protein-coding Genes

3630 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive208 - 322Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive436 - 3236Not Available
permeaseATB93_00005Not AvailablePositive467 - 135730962.8
gnat family acetyltransferaseATB93_00010P79081Positive1354 - 183317436.9
cation transporterATB93_00015Q8XGT8Positive1833 - 215611273.3
alpha-glucosidaseATB93_00020Q9P999Positive2576 - 493385025.2
16s ribosomal rnaNot AvailableNot AvailablePositive3979 - 5472Not Available
histidinol phosphataseATB93_00025Not AvailableNegative4953 - 609541731.8
hypothetical proteinATB93_00030Not AvailableNegative6138 - 666218964.3
inorganic pyrophosphataseATB93_00035P65744Negative6803 - 734219696.5

Displaying genes 1 – 10 of 3682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

261 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 261 metabolites

Health Effects

No health effects information available for this bacterium.