Citrobacter pasteurii

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter pasteurii is a Gram-negative rod-shaped bacterium that has been identified in cheese habitats. This organism exhibits the presence of flagella, which facilitates its motility. Notably, Citrobacter pasteurii possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in dairy environments. The presence of Citrobacter pasteurii in cheese underscores its ecological role within dairy fermentation processes. As a member of the Enterobacteriaceae family, it may influence the microbiota dynamics, potentially affecting the flavor, texture, and safety of cheese products. The specific accession for this bacterium is CDHL00000000.1, which aids in its identification and categorization in scientific databases. Overall, the study of Citrobacter pasteurii within cheese habitats highlights the importance of microbial diversity in food matrices and suggests that further research could elucidate its role in dairy fermentation and its impact on food quality. Understanding the ecological interactions of such microorganisms can contribute to better management practices in cheese production and enhance food safety standards.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter pasteurii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter pasteurii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcheese
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CIP 55.13 genome assembly

Gene Summary

Adenine Count

1202577 bp

Thymine Count

1200892 bp

Guanine Count

1305642 bp

Cytosine Count

1277512 bp

Genome Length

4986623 bp

Protein-coding Genes

4558 genes

Non-Coding Genes

298 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative cytoplasmic proteinNONENot AvailableNegative3435649 - 343597213130.4
putative transport proteinNONENot AvailablePositive3436750 - 343810848599.1
fig001943: hypothetical protein yajqNONENot AvailableNegative3438195 - 343868618369.9
2-dehydropantoate 2-reductaseNONENot AvailablePositive3438861 - 343977233871.7
dj-1/yajl/pfpi superfamily, includes chaperone protein yajl (former thij), parkinsonism-associated protein dj-1, peptidases pfpi, hsp31NONENot AvailablePositive3439735 - 344032520784.2
anaerobic dimethyl sulfoxide reductase chain cNONENot AvailableNegative3440365 - 344115328662.4
anaerobic dimethyl sulfoxide reductase chain bNONENot AvailableNegative3441164 - 344171220636.9
anaerobic dimethyl sulfoxide reductase chain aNONENot AvailableNegative3441715 - 344387180178.4
transcriptional regulator, iclr familyNONENot AvailablePositive3444220 - 344491524794.7
trna s(4)u 4-thiouridine synthase (former thii) / rhodanese-like domain required for thiamine synthesisNONENot AvailableNegative3444952 - 344640054818.1

Displaying genes 3451 – 3460 of 4856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.