Sphingomonas taxi str. ATCC 55669

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas taxi
StrainATCC 55669

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingomonas taxi str. ATCC 55669
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas taxi str. ATCC 55669

NZ_CP009571.1NZ_CP009573.1NZ_CP009572.1

Gene Summary

Adenine Count

620364 bp

Thymine Count

614490 bp

Guanine Count

1299721 bp

Cytosine Count

1324524 bp

Genome Length

3859099 bp

Protein-coding Genes

3545 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Large packaging proteinMC45_RS15760Not Available+3442178 - 344350346868.9
Portal proteinMC45_RS15765Not Available+3443706 - 344481838792.3
Hypothetical proteinMC45_RS15770Not Available+3444815 - 344511710722.2
Putative prohead proteaseMC45_RS15775Not Available+3445105 - 344548813505.4
Putative major capsid proteinMC45_RS15780Not Available+3445526 - 344652734858.4
hypothetical proteinMC45_RS15785Not Available+3446551 - 344702416308.7
duf3168 domain-containing proteinMC45_RS15790Not Available+3447021 - 344740413674.8
Gene transfer aget (gta) orfg9-like phage major tail proteinMC45_RS15795Not Available+3447417 - 344782413727.1
gene transfer agent family proteinMC45_RS15800Not Available+3447821 - 344813511219.9
phage tail assembly chaperoneMC45_RS15805Not Available+3448132 - 34483326300.38

Displaying genes 1 – 10 of 3802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

86 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da

Displaying 1–10 of 86 metabolites