Sphingomonas taxi str. ATCC 55669

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas taxi str. ATCC 55669 is a rod-shaped bacterium characterized by the presence of flagella, which enable motility. This species has a unique genomic structure, containing three replicons, which may contribute to its genetic diversity and adaptability in various environments. The organism is cataloged under multiple accession numbers, including NZ_CP009571.1, NZ_CP009573.1, and NZ_CP009572.1, indicating its presence in genomic databases that facilitate further research and characterization. The Sphingomonas genus is known for its ability to degrade a variety of complex organic compounds, suggesting its potential role in bioremediation processes. Although specific ecological interactions for Sphingomonas taxi str. ATCC 55669 are not detailed, the traits observed in related species may indicate its capability to thrive in diverse environments, including those impacted by pollutants. The combination of its rod shape and flagellar motility likely enhances its competitive advantage in nutrient acquisition and colonization of different niches. This bacterium’s genomic structure with multiple replicons may also play a role in its adaptability to changing ecological conditions, which could be crucial for survival in fluctuating environments. Therefore, Sphingomonas taxi str. ATCC 55669 exemplifies the potential for microbial species to contribute to ecosystem health and resilience through their metabolic versatility and adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas taxi
StrainATCC 55669

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas taxi str. ATCC 55669
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas taxi strain ATCC 55669 chromosome, complete genome.

Gene Summary

Adenine Count

620364 bp

Thymine Count

614490 bp

Guanine Count

1299721 bp

Cytosine Count

1324524 bp

Genome Length

3859099 bp

Protein-coding Genes

3545 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseMC45_RS12035Not AvailablePositive2635241 - 263614330992.8
duf2794 domain-containing proteinMC45_RS12040Not AvailableNegative2636234 - 263657212588.6
serine o-acetyltransferase epscMC45_RS12045Not AvailableNegative2636572 - 263726424781.1
sulfite exporter taue/safe family proteinMC45_RS12050Not AvailablePositive2637448 - 263822126518.1
alkyl hydroperoxide reductase subunit cMC45_RS12055Not AvailablePositive2638374 - 263893720578.4
alkyl hydroperoxide reductase subunit fMC45_RS12060Not AvailablePositive2639043 - 264062956369.5
hydrogen peroxide-inducible genes activatorMC45_RS12065Not AvailablePositive2640815 - 264171733102.4
fasciclin domain-containing proteinMC45_RS12070Not AvailablePositive2641733 - 264234720610.9
molybdenum cofactor biosynthesis protein moaeMC45_RS12075Not AvailableNegative2642468 - 264292315861.8
molybdopterin converting factor subunit 1MC45_RS12080Not AvailableNegative2642920 - 26431779267.23

Displaying genes 2491 – 2500 of 3802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

86 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da

Displaying 1–10 of 86 metabolites

Health Effects

No health effects information available for this bacterium.