Clostridium sp. HMP27

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. HMP27 is characterized by having a single replicon, which indicates a streamlined genomic structure that is typical for certain bacterial species within the Clostridia class. The accession number for this strain is JMFY00000000.1, which serves as a unique identifier for the genomic sequence data available in public databases. Clostridium species are known for their diverse metabolic capabilities, often thriving in anaerobic environments, which may suggest ecological niches where they play significant roles in nutrient cycling. While specific metabolic traits of Clostridium sp. HMP27 are not detailed in the provided data, the genus Clostridium is generally associated with fermentation processes and can contribute to the breakdown of complex organic materials. Understanding the genomic structure and potential metabolic pathways of Clostridium sp. HMP27 may offer insights into its ecological role, particularly in environments where anaerobic conditions prevail, such as soils or the gastrointestinal tracts of various animals. The presence of a single replicon may also indicate evolutionary adaptations that allow this strain to efficiently manage its genetic information, which can be crucial for survival in competitive microbial communities. Overall, the traits of Clostridium sp. HMP27 highlight its potential significance within its ecological niche, although further research would be necessary to elucidate specific functional capabilities and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. HMP27
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. HMP27


Gene Summary

Adenine Count

1370331 bp

Thymine Count

1272894 bp

Guanine Count

650494 bp

Cytosine Count

557231 bp

Genome Length

3850950 bp

Protein-coding Genes

3377 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1757212 - 1757223Not Available
Rna polymerase sigma factorDP68_08645Not AvailablePositive1766542 - 176760940675.3
sam-dependent methyltransferaseDP68_08650Not AvailablePositive1767678 - 176837326808.6
hypothetical proteinDP68_08655Not AvailablePositive1768373 - 176918229896.3
hypothetical proteinDP68_08660Not AvailablePositive1769308 - 177003328679.5
Site-specific integraseDP68_08665Not AvailableNegative1770557 - 177171145218.5
ReprDP68_08670Not AvailableNegative1772151 - 177253714599.3
Hypothetical proteinDP68_08675Not AvailablePositive1772709 - 17729459063.06
Hth_xre family transcriptional regulatorDP68_08680Not AvailablePositive1773010 - 17732258033.86
Helix-turn-helix domain-containing proteinDP68_08685Not AvailablePositive1773231 - 17734498300.23

Displaying genes 1 – 10 of 3525 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.