Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | SAMN06297358_0983 | Not Available | Negative | 1244351 - 1245073 | 27050.8 |
| glucose-6-phosphate 1-dehydrogenase | SAMN06297358_0984 | Not Available | Negative | 1245190 - 1246698 | 57563.7 |
| 6-phosphogluconate dehydrogenase | SAMN06297358_0985 | Not Available | Negative | 1246807 - 1248222 | 51942.0 |
| polyphosphate glucokinase | SAMN06297358_0986 | Not Available | Negative | 1248266 - 1249018 | 27536.2 |
| hypothetical protein | SAMN06297358_0987 | Not Available | Negative | 1249087 - 1249416 | 12651.6 |
| hypothetical protein | SAMN06297358_0988 | Not Available | Negative | 1249583 - 1250029 | 16232.3 |
| hypothetical protein | SAMN06297358_0989 | Not Available | Negative | 1250026 - 1250586 | 20545.1 |
| Trna-ser | Not Available | Not Available | Positive | 1250729 - 1250816 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1251204 - 1251288 | Not Available |
| membrane protein | SAMN06297358_0992 | Not Available | Negative | 1251683 - 1252603 | 34629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

