Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | SAMN06297358_0973 | Not Available | Positive | 1235239 - 1235598 | 13602.6 |
| acyl-coa thioester hydrolase | SAMN06297358_0974 | Not Available | Negative | 1235612 - 1236094 | 18918.9 |
| hsp20 family protein | SAMN06297358_0975 | Not Available | Positive | 1236173 - 1236607 | 16596.6 |
| hypothetical protein | SAMN06297358_0976 | Not Available | Positive | 1236864 - 1238177 | 49488.3 |
| 23s rrna m(6)a-1618 methyltransferase | SAMN06297358_0977 | Not Available | Positive | 1238177 - 1239133 | 35899.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN06297358_0978 | Not Available | Negative | 1239268 - 1239708 | 16767.3 |
| hypothetical protein | SAMN06297358_0979 | Not Available | Negative | 1239801 - 1240292 | 18590.6 |
| hypothetical protein | SAMN06297358_0980 | Not Available | Positive | 1240417 - 1241091 | 23443.8 |
| polyphosphate kinase | SAMN06297358_0981 | Not Available | Positive | 1241317 - 1243371 | 79243.6 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN06297358_0982 | Not Available | Positive | 1243373 - 1244248 | 33156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

