Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0952 | Not Available | Negative | 1214468 - 1215646 | 44129.1 |
| aspartate kinase | SAMN06297358_0953 | Not Available | Negative | 1215744 - 1217009 | 47999.0 |
| protein of unknown function | SAMN06297358_0954 | Not Available | Negative | 1217010 - 1217819 | 30604.5 |
| acetyltransferase (gnat) family protein | SAMN06297358_0955 | Not Available | Negative | 1217830 - 1218297 | 17882.3 |
| hypothetical protein | SAMN06297358_0956 | Not Available | Negative | 1218339 - 1219031 | 26256.7 |
| protein of unknown function | SAMN06297358_0957 | Not Available | Positive | 1219197 - 1219706 | 19251.8 |
| dna mismatch repair protein muts2 | SAMN06297358_0958 | Not Available | Positive | 1219708 - 1222086 | 90214.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_0959 | Not Available | Positive | 1222172 - 1222798 | 23928.8 |
| acetyltransferase (gnat) family protein | SAMN06297358_0960 | Not Available | Positive | 1222987 - 1223565 | 21859.4 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06297358_0962 | Not Available | Positive | 1224334 - 1225413 | 39582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

