Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0942 | Not Available | Positive | 1206591 - 1207361 | 29430.5 |
| dolichol-phosphate mannosyltransferase | SAMN06297358_0943 | Not Available | Negative | 1207378 - 1208103 | 27832.0 |
| proton-dependent oligopeptide transporter, pot family | SAMN06297358_0944 | Not Available | Negative | 1208206 - 1209678 | 54391.2 |
| pyridoxamine 5'-phosphate oxidase | SAMN06297358_0945 | Not Available | Negative | 1209785 - 1210435 | 24947.7 |
| putative transcriptional regulator | SAMN06297358_0946 | Not Available | Positive | 1210724 - 1211287 | 21091.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN06297358_0947 | Not Available | Positive | 1211346 - 1212068 | 27874.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN06297358_0948 | Not Available | Positive | 1212156 - 1212446 | 11061.3 |
| putative abc transport system atp-binding protein | SAMN06297358_0949 | Not Available | Positive | 1212549 - 1213307 | 27695.4 |
| cob(i)alamin adenosyltransferase | SAMN06297358_0950 | Not Available | Positive | 1213384 - 1213938 | 20511.7 |
| protein of unknown function | SAMN06297358_0951 | Not Available | Positive | 1214019 - 1214240 | 8601.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

