Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0922 | Not Available | Negative | 1182245 - 1182433 | 7222.2 |
| copper homeostasis protein | SAMN06297358_0923 | Not Available | Negative | 1182430 - 1183194 | 27486.0 |
| hypothetical protein | SAMN06297358_0924 | Not Available | Negative | 1183210 - 1184091 | 33569.6 |
| asparaginase | SAMN06297358_0925 | Not Available | Negative | 1184140 - 1185177 | 37239.5 |
| predicted amidohydrolase | SAMN06297358_0926 | Not Available | Negative | 1185186 - 1185986 | 31169.3 |
| methionine aminotransferase | SAMN06297358_0927 | Not Available | Negative | 1186007 - 1187152 | 42868.9 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN06297358_0928 | Not Available | Negative | 1187218 - 1188420 | 43451.4 |
| hypothetical protein | SAMN06297358_0929 | Not Available | Positive | 1188553 - 1189323 | 28920.4 |
| uncharacterized membrane protein ycap, duf421 family | SAMN06297358_0930 | Not Available | Positive | 1189372 - 1190070 | 26205.3 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN06297358_0931 | Not Available | Positive | 1190141 - 1191358 | 47824.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

