Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0912 | Not Available | Positive | 1173120 - 1173842 | 28248.7 |
| wd40-like beta propeller repeat | SAMN06297358_0913 | Not Available | Negative | 1173843 - 1175732 | 70882.3 |
| organic radical activating enzyme | SAMN06297358_0914 | Not Available | Negative | 1175804 - 1176427 | 23309.8 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | SAMN06297358_0915 | Not Available | Positive | 1176508 - 1176837 | 12395.0 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN06297358_0916 | Not Available | Negative | 1176830 - 1177249 | 15971.1 |
| hypothetical protein | SAMN06297358_0917 | Not Available | Negative | 1177251 - 1177517 | 10175.1 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN06297358_0918 | Not Available | Negative | 1177844 - 1178722 | 31685.5 |
| gtp-binding protein lepa | SAMN06297358_0919 | Not Available | Negative | 1178809 - 1180596 | 66721.9 |
| hypothetical protein | SAMN06297358_0920 | Not Available | Positive | 1180716 - 1181486 | 29573.0 |
| hypothetical protein | SAMN06297358_0921 | Not Available | Negative | 1181838 - 1182248 | 15907.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

