Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit | SAMN06297358_0902 | Not Available | Negative | 1161743 - 1162480 | 26037.1 |
| tetratricopeptide repeat-containing protein | SAMN06297358_0903 | Not Available | Positive | 1162675 - 1163010 | 12885.0 |
| chromate transporter | SAMN06297358_0904 | Not Available | Positive | 1163136 - 1164338 | 43686.0 |
| hypothetical protein | SAMN06297358_0905 | Not Available | Positive | 1164436 - 1165182 | 28440.5 |
| replicative dna helicase | SAMN06297358_0906 | Not Available | Negative | 1165239 - 1166798 | 58048.3 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN06297358_0907 | Not Available | Positive | 1167061 - 1167828 | 27927.2 |
| mannose-1-phosphate guanylyltransferase | SAMN06297358_0908 | Not Available | Negative | 1167898 - 1168989 | 40849.0 |
| arabinose-5-phosphate isomerase | SAMN06297358_0909 | Not Available | Negative | 1169011 - 1169976 | 34598.1 |
| atp-dependent dna helicase recq | SAMN06297358_0910 | Not Available | Positive | 1170010 - 1172253 | 84324.3 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN06297358_0911 | Not Available | Positive | 1172304 - 1173116 | 29229.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

