Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl-trna synthetase, class ii | SAMN06297358_0078 | Not Available | Negative | 79601 - 81310 | 64810.8 |
| hypothetical protein | SAMN06297358_0079 | Not Available | Negative | 82221 - 82784 | 21823.4 |
| long-chain acyl-coa synthetase | SAMN06297358_0080 | Not Available | Negative | 82814 - 84724 | 71642.7 |
| hypothetical protein | SAMN06297358_0081 | Not Available | Positive | 84911 - 85744 | 31142.2 |
| ankyrin repeat | SAMN06297358_0082 | Not Available | Negative | 85928 - 87271 | 48504.4 |
| ankyrin repeat | SAMN06297358_0083 | Not Available | Negative | 87382 - 88545 | 44054.1 |
| iron-sulfur cluster assembly protein | SAMN06297358_0084 | Not Available | Negative | 88676 - 89002 | 11879.9 |
| nitrogen fixation protein nifu | SAMN06297358_0085 | Not Available | Negative | 89072 - 89485 | 14888.7 |
| cysteine desulfurase iscs | SAMN06297358_0086 | Not Available | Negative | 89609 - 90820 | 44228.0 |
| methylmalonyl-coa epimerase | SAMN06297358_0087 | Not Available | Positive | 91044 - 91445 | 14897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

