Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN06297358_0892 | Not Available | Negative | 1148505 - 1149266 | 27877.5 |
| diacylglycerol kinase family enzyme | SAMN06297358_0893 | Not Available | Positive | 1149305 - 1150249 | 35586.8 |
| peptidase family m23 | SAMN06297358_0894 | Not Available | Positive | 1150257 - 1151567 | 48269.9 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06297358_0895 | Not Available | Positive | 1151682 - 1152896 | 44988.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_0896 | Not Available | Negative | 1152949 - 1154019 | 39801.1 |
| glycine dehydrogenase | SAMN06297358_0897 | Not Available | Negative | 1154300 - 1157179 | 104832.0 |
| protein of unknown function | SAMN06297358_0898 | Not Available | Negative | 1157342 - 1158418 | 41863.4 |
| mfs transporter, nhs family, xanthosine permease | SAMN06297358_0899 | Not Available | Negative | 1158438 - 1159823 | 51976.2 |
| hypothetical protein | SAMN06297358_0900 | Not Available | Negative | 1159994 - 1160614 | 22952.4 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN06297358_0901 | Not Available | Negative | 1160668 - 1161636 | 33479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

