Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SAMN06297358_0872 | Not Available | Positive | 1119954 - 1123019 | 114900.0 |
| calcineurin-like phosphoesterase | SAMN06297358_0873 | Not Available | Positive | 1123022 - 1124308 | 48830.9 |
| transcriptional regulator, lysr family | SAMN06297358_0874 | Not Available | Negative | 1124399 - 1125262 | 33180.2 |
| ribosomal protein s18 acetylase rimi | SAMN06297358_0875 | Not Available | Positive | 1125335 - 1125865 | 20286.0 |
| acetyltransferase (gnat) family protein | SAMN06297358_0876 | Not Available | Positive | 1125884 - 1126300 | 15994.2 |
| eama-like transporter family protein | SAMN06297358_0877 | Not Available | Positive | 1126352 - 1127239 | 32403.8 |
| pas domain s-box-containing protein | SAMN06297358_0878 | Not Available | Negative | 1127258 - 1129483 | 83609.8 |
| response regulator receiver domain-containing protein | SAMN06297358_0879 | Not Available | Positive | 1129628 - 1129987 | 13157.9 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN06297358_0880 | Not Available | Positive | 1130150 - 1132387 | 84037.1 |
| putative redox protein | SAMN06297358_0881 | Not Available | Negative | 1132432 - 1132836 | 14941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

