Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0862 | Not Available | Negative | 1106502 - 1107617 | 40694.6 |
| hypothetical protein | SAMN06297358_0863 | Not Available | Positive | 1108010 - 1108528 | 20064.1 |
| cobalt-zinc-cadmium resistance protein czca | SAMN06297358_0864 | Not Available | Positive | 1108631 - 1112968 | 159632.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN06297358_0865 | Not Available | Positive | 1112974 - 1114098 | 42058.7 |
| hypothetical protein | SAMN06297358_0866 | Not Available | Positive | 1114334 - 1115197 | 30228.1 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN06297358_0867 | Not Available | Positive | 1115207 - 1116259 | 40316.1 |
| signal transduction histidine kinase | SAMN06297358_0868 | Not Available | Positive | 1116328 - 1117602 | 48245.3 |
| hypothetical protein | SAMN06297358_0869 | Not Available | Positive | 1117859 - 1118092 | 8869.81 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_0870 | Not Available | Positive | 1118214 - 1118777 | 22206.6 |
| fecr family protein | SAMN06297358_0871 | Not Available | Positive | 1118835 - 1119836 | 37459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

