Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0852 | Not Available | Positive | 1084805 - 1087429 | 98402.4 |
| hypothetical protein | SAMN06297358_0853 | Not Available | Positive | 1087429 - 1090890 | 129622.0 |
| lysophospholipase l1 | SAMN06297358_0854 | Not Available | Positive | 1090899 - 1092341 | 53561.8 |
| protein of unknown function | SAMN06297358_0855 | Not Available | Positive | 1092463 - 1093413 | 35717.5 |
| transporter, sss family | SAMN06297358_0856 | Not Available | Positive | 1093606 - 1095291 | 61045.3 |
| hypothetical protein | SAMN06297358_0857 | Not Available | Positive | 1096099 - 1097160 | 36336.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0858 | Not Available | Positive | 1097180 - 1098760 | 55015.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0859 | Not Available | Positive | 1099000 - 1100616 | 57337.4 |
| hypothetical protein | SAMN06297358_0860 | Not Available | Positive | 1100627 - 1104037 | 126060.0 |
| fad dependent oxidoreductase | SAMN06297358_0861 | Not Available | Positive | 1104139 - 1106415 | 84404.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

