Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0842 | Not Available | Negative | 1071139 - 1071318 | 6822.14 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN06297358_0843 | Not Available | Negative | 1071369 - 1072226 | 31544.6 |
| hypothetical protein | SAMN06297358_0844 | Not Available | Positive | 1072368 - 1074443 | 79269.6 |
| Trna-ser | Not Available | Not Available | Positive | 1074511 - 1074597 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1074624 - 1074697 | Not Available |
| transcriptional regulator, gntr family | SAMN06297358_0847 | Not Available | Negative | 1075199 - 1076227 | 39744.1 |
| beta-glucosidase | SAMN06297358_0848 | Not Available | Positive | 1076541 - 1079048 | 92559.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0849 | Not Available | Positive | 1079108 - 1082251 | 115803.0 |
| starch-binding associating with outer membrane | SAMN06297358_0850 | Not Available | Positive | 1082277 - 1083884 | 60581.8 |
| protein of unknown function | SAMN06297358_0851 | Not Available | Positive | 1083890 - 1084789 | 32833.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

