Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-methylhydantoinase b | SAMN06297358_0821 | Not Available | Positive | 1046791 - 1048458 | 60120.5 |
| hypothetical protein | SAMN06297358_0822 | Not Available | Positive | 1048515 - 1048853 | 12628.3 |
| hypothetical protein | SAMN06297358_0823 | Not Available | Positive | 1048850 - 1049935 | 39007.2 |
| n-methylhydantoinase a/oxoprolinase/acetone carboxylase, beta subunit | SAMN06297358_0824 | Not Available | Positive | 1049939 - 1051522 | 56930.4 |
| hypothetical protein | SAMN06297358_0825 | Not Available | Negative | 1051602 - 1051949 | 13731.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN06297358_0826 | Not Available | Positive | 1052194 - 1053660 | 54298.1 |
| peroxiredoxin | SAMN06297358_0827 | Not Available | Positive | 1053743 - 1054858 | 41775.9 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN06297358_0828 | Not Available | Positive | 1054958 - 1055647 | 25985.6 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN06297358_0829 | Not Available | Negative | 1056066 - 1057181 | 43593.7 |
| spfh domain / band 7 family protein | SAMN06297358_0831 | Not Available | Positive | 1058148 - 1059245 | 41909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

