Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglutaconyl-coa hydratase | SAMN06297358_0811 | Not Available | Negative | 1031012 - 1031788 | 28497.1 |
| competence protein comec | SAMN06297358_0812 | Not Available | Negative | 1031792 - 1033879 | 80708.8 |
| helix-hairpin-helix motif-containing protein | SAMN06297358_0813 | Not Available | Negative | 1034023 - 1036065 | 77698.1 |
| hypothetical protein | SAMN06297358_0814 | Not Available | Negative | 1036055 - 1036858 | 29210.0 |
| merr hth family regulatory protein | SAMN06297358_0815 | Not Available | Negative | 1036936 - 1037271 | 13164.0 |
| alanyl-trna synthetase | SAMN06297358_0816 | Not Available | Positive | 1037489 - 1040122 | 98533.9 |
| hypothetical protein | SAMN06297358_0817 | Not Available | Positive | 1040229 - 1040777 | 20271.2 |
| hypothetical protein | SAMN06297358_0818 | Not Available | Negative | 1040858 - 1042096 | 48247.2 |
| iron complex outermembrane recepter protein | SAMN06297358_0819 | Not Available | Positive | 1042207 - 1044558 | 86127.5 |
| n-methylhydantoinase a | SAMN06297358_0820 | Not Available | Positive | 1044735 - 1046789 | 76010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

