Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN06297358_0801 | Not Available | Negative | 1017239 - 1017787 | 20042.7 |
| adenylosuccinate lyase | SAMN06297358_0802 | Not Available | Negative | 1017923 - 1019269 | 50325.9 |
| hypothetical protein | SAMN06297358_0803 | Not Available | Negative | 1019396 - 1019593 | 6858.08 |
| protein of unknown function | SAMN06297358_0804 | Not Available | Negative | 1019752 - 1020390 | 23229.6 |
| l,d-transpeptidase catalytic domain | SAMN06297358_0805 | Not Available | Positive | 1020545 - 1022080 | 58008.2 |
| l,d-transpeptidase catalytic domain | SAMN06297358_0806 | Not Available | Negative | 1022087 - 1022863 | 28161.5 |
| protein of unknown function | SAMN06297358_0807 | Not Available | Negative | 1023181 - 1025835 | 97405.4 |
| dipeptidyl-peptidase-4 | SAMN06297358_0808 | Not Available | Negative | 1026156 - 1028327 | 80857.9 |
| phosphoglycerol transferase mdob | SAMN06297358_0809 | Not Available | Negative | 1028365 - 1030230 | 71275.6 |
| protein of unknown function | SAMN06297358_0810 | Not Available | Negative | 1030311 - 1030991 | 24688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

