Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40-like beta propeller repeat | SAMN06297358_0068 | Not Available | Negative | 71685 - 72623 | 36307.4 |
| protein of unknown function | SAMN06297358_0069 | Not Available | Negative | 72651 - 73136 | 18583.8 |
| manganese transport protein | SAMN06297358_0070 | Not Available | Negative | 73348 - 75210 | 68148.3 |
| iron (metal) dependent repressor, dtxr family | SAMN06297358_0071 | Not Available | Negative | 75210 - 75863 | 24919.1 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN06297358_0072 | Not Available | Positive | 76006 - 76476 | 18015.3 |
| gxxexxy protein | SAMN06297358_0073 | Not Available | Negative | 76507 - 76887 | 14577.9 |
| uracil-dna glycosylase | SAMN06297358_0074 | Not Available | Negative | 77170 - 77847 | 25359.3 |
| thioredoxin | SAMN06297358_0075 | Not Available | Negative | 77894 - 78412 | 19497.8 |
| hypothetical protein | SAMN06297358_0076 | Not Available | Positive | 78499 - 79044 | 20960.0 |
| hypothetical protein | SAMN06297358_0077 | Not Available | Negative | 79096 - 79311 | 8511.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

