Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yegl, contains vwa domain of tery type | SAMN06297358_0791 | Not Available | Positive | 1006296 - 1006931 | 23215.8 |
| uncharacterized conserved protein yegl, contains vwa domain of tery type | SAMN06297358_0792 | Not Available | Positive | 1006943 - 1007992 | 38575.9 |
| protein phosphatase 2c | SAMN06297358_0793 | Not Available | Positive | 1007992 - 1009386 | 51668.4 |
| protein kinase domain-containing protein | SAMN06297358_0794 | Not Available | Positive | 1009393 - 1010916 | 58460.3 |
| tellurite resistance protein terc | SAMN06297358_0795 | Not Available | Positive | 1010932 - 1011915 | 36735.8 |
| Trna-lys | Not Available | Not Available | Positive | 1012295 - 1012370 | Not Available |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN06297358_0797 | Not Available | Positive | 1012594 - 1013160 | 20728.0 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN06297358_0798 | Not Available | Positive | 1013272 - 1014594 | 49752.8 |
| prolipoprotein diacylglyceryltransferase | SAMN06297358_0799 | Not Available | Positive | 1015069 - 1016223 | 42440.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN06297358_0800 | Not Available | Positive | 1016227 - 1017021 | 29852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

