Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0761 | Not Available | Positive | 975539 - 976969 | 55357.7 |
| hypothetical protein | SAMN06297358_0762 | Not Available | Positive | 976982 - 978475 | 58258.0 |
| phytoene dehydrogenase-related protein | SAMN06297358_0763 | Not Available | Positive | 978475 - 979944 | 52960.6 |
| conserved hypothetical integral membrane protein | SAMN06297358_0764 | Not Available | Positive | 979931 - 981193 | 45777.4 |
| heme oxygenase | SAMN06297358_0765 | Not Available | Negative | 981292 - 981855 | 20633.5 |
| carbon starvation protein | SAMN06297358_0766 | Not Available | Positive | 982236 - 984077 | 66634.5 |
| small conductance mechanosensitive channel | SAMN06297358_0767 | Not Available | Positive | 984275 - 985084 | 30074.6 |
| two component transcriptional regulator, luxr family | SAMN06297358_0768 | Not Available | Positive | 985175 - 985810 | 24142.3 |
| signal transduction histidine kinase | SAMN06297358_0769 | Not Available | Positive | 985839 - 987575 | 67163.9 |
| transcriptional regulator, tetr family | SAMN06297358_0770 | Not Available | Negative | 987585 - 988226 | 24545.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

